The workflow for the analysis of most sequencing-based epigenomic data (especially CHIP-SEQ, ATAC-SEQ and related experiments) involves the identification, annotation and analysis of peaks or genomic regions with signals of interest.Now, CD Genomics provides you with a variety of epigenomic peak calling and annotation service to meet your scientific research needs. As one of the most competitive sequencing and data analysis service providers, we use bioinformatics to help you explore genetic information and decipher the nature of life. We have the skills and experience in data analysis to meet our clients' individual data analysis needs.

Specific Epigenomic Peak Calling and Annotation Approaches We Offer

• Raw sequencing reads are first quality controlled and aligned to the reference genome and then used to normalize the reads to cover the signal using a possible control library (IP pre-input and IP with non-specific antibodies, in the case of ChIP-seq).
• Peak calling tool was used to identify peaks in the signal. This stage may require careful adjustment of parameters to optimize the analysis of the protocol used.
• To enable further analysis, peaks are annotated with relevant information, such as read statistics, and nearby or overlapping features, such as genes, regulatory elements, and binding motifs.
• Gene set enrichment analysis can be performed with gene annotated peaks to further explain downstream effects.

Service Highlights

• Annotate peaks with gene and genomic signature information.
• Use functional enrichment tools to obtain the biological context of identified binding sites..
• Use sequence data of peaks to identify possible over-represented motifs

We Can Help Our Clients:

• Genome annotation to construct genetic maps.
• Reveal the different pathways at play in the organism.
• Provide insights into evolutionary processes.
• Help understand structural differences and complex rearrangements, such as insertions, inversions, translocations and variation in copy number.
• Assesses the level of variable splicing and gene expression studies.

Service Process

Deliverables

• Related experimental results raw data
• Experimental report
• Data analysis
• Image and result analysis

Our Features

Why Choose Us?

At CD Genomics, our goal is to apply innovative technologies to epigenomic peak calling and annotation service. We offer innovative, flexible and scalable solutions that can meet the needs of our customers. We strive to meet this challenge as a global company that places a high priority on collaborative interactions, rapid delivery of solutions, and providing the highest level of quality. If you would like to know more about this service, please feel free to contact us.