CD Genomics Blog

CD Genomics Blog

Thank you for visiting the CD Genomics Blog! Here, you will find articles on the latest advances in sequencing technology, biotech research developments, and technical introductions. Our blog helps researchers and professionals deepen their understanding and stay updated on industry trends.

We also share company news, offer insights into daily life at CD Genomics, and provide resources to enhance your knowledge in sequencing and genomics.

The First T2T Genome of Grape Provides New Insights into Its Genetic Breeding and Evolutionary Studies

The First T2T Genome of Grape Provides New Insights into Its Genetic Breeding and Evolutionary Studies

Since the first human genome was published in 2000, many reference genomes have been assembled successively in various species. However, the highly repetitive sequences (telomeric, mitotic, ribosomal DNA) clustered in the genome have resulted in many missing fragments in the assembled genomes. Fortunately, thanks to improvements in sequencing technologies and computational algorithms, a new era […]

Integrative Genomic and Transcriptomic Analysis of Immunotherapy in Advanced NSCLC Using WES and RNA-seq

Integrative Genomic and Transcriptomic Analysis of Immunotherapy in Advanced NSCLC Using WES and RNA-seq

The use of PD-1/PD-L1 inhibitors has significantly improved overall survival in a subset of non-small cell lung cancer (NSCLC) patients, but only about 20% of patients respond to treatment. Identifying predictors of response is crucial to improve patient selection for immunotherapy. However, current understanding of relevant predictors is limited by the lack of large, multi-omic […]

Difference between genotyping and DNA sequencing

Difference between genotyping and DNA sequencing

In the realm of molecular biology research, there exist two oft-confounded methodologies used with regularity: genotyping and DNA sequencing. Despite their seeming synonymy, these methods differ considerably regarding their impact on research outcomes and applications. This blog post endeavors to elucidate the contrasts between genotyping and DNA sequencing, while exploring their respective benefits and drawbacks. […]

How Does PacBio SMRT Sequencing facilitate AAV Vector Development?

How Does PacBio SMRT Sequencing facilitate AAV Vector Development?

Recombinant adeno-associated virus (AAV) has emerged as one of the primary vectors for gene therapy. This is because it has many desirable properties, including lack of pathogenicity, efficient infection of dividing and non-dividing cells, and sustained maintenance of the viral genome. With an excellent safety profile in numerous preclinical studies and hundreds of clinical trials […]

How to Sequence Chloroplast Genome and Why?

How to Sequence Chloroplast Genome and Why?

Introduction As one of the organelles that contain their own genome, chloroplasts (cp) are plastids with double membranes and vesicle-like structures. These tiny organelles convert solar energy, synthesize organic matters, and feed almost the entire life on Earth while providing for their own needs. However, it seems that chloroplasts are not satisfied with this, as […]

Genome Sequencing Drives Progress in Mitochondrial Diseases Research

Genome Sequencing Drives Progress in Mitochondrial Diseases Research

Mitochondrial diseases (MitD) are an important clinical or medical challenge. Research has shown that genome sequencing can help to enhance the understanding of the genetic causes of MitD and to accelerate the development of functional research, clinical tests and therapeutic tools. What is Mitochondrial Disease? Mitochondria are membrane-bound organelles found in most eukaryotic cells that […]

RNA Sequencing for The Analysis of Exosome Transcriptome

RNA Sequencing for The Analysis of Exosome Transcriptome

Introduction to Exosomes Exosomes are small extracellular vesicles (EVs), ranging from 30 to 100 nm in diameter, carrying heterogeneous cargo, including miRNA, mRNA, lncRNA, lipids, and proteins. Exosomes widely present in very large quantities in all eukaryotic cells, mediating intercellular communication after being released into the extracellular space. In humans, exosomes nearly exist in all […]

What Is Ribo-Seq (Ribosome Footprinting)?

What Is Ribo-Seq (Ribosome Footprinting)?

Introduction to Ribosome Profiling Ribosome-profiling techniques were developed in response to the importance of measuring gene expression at the translational level. Ribosome profiling is a direct technique for determining the precise mRNA region read by the ribosome and for directly examining the transcripts associated with the translation machinery. Ribosome profiling is a cellular snapshot of […]

Utilizing ATAC-Sequencing Approach to Predict Transcription Factors Binding in Individual Cells

Utilizing ATAC-Sequencing Approach to Predict Transcription Factors Binding in Individual Cells

Introduction to Transcription Factors Molecules important in controlling gene expression are transcription factors. Normally they are proteins, although they are composed of short, non-coding RNA as well. Transcription variables are also typically seen working in groups or complexes, creating multiple connections that allow varying degrees of control over transcription rates. Transcription factors (TFs) attach to […]

How to Analyze Single-Cell Genomics Data?

How to Analyze Single-Cell Genomics Data?

Introduction to Single Cell Genomics James Eberwine et al. and Iscove and colleagues were the first to sequence an entire transcriptome at the level of a single cell, using linear amplification by in vitro transcription and exponential amplification by PCR, respectively, to expand the complementary DNAs (cDNAs) of a single cell. These methods were first […]

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